Biochemistry Laboratories Building
Pike Lab Space
Thermocyclers
Nanodrop
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Links

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Data Analysis Tools

QuEST – ChIP-seq data analysis package

HOMER – Hypergeometric Optimization of Motif Enrichment — ChIP-seq and Motif Discovery

Bowtie – An ultrafast memory-efficient short read aligner

Tophat – A spliced read mapper for RNA-Seq

Cufflinks – Transcript assembly, differential expression, and differential regulation for RNA-Seq

UCSC Genome Browser

Ensembl Genome Browser

Primer-BLAST – primer designing tool for qPCR and qRT-PCR

DAVID – Database for Annotation, Visulatization and Integrated Discovery – Gene annotation

SEQanswers — Forum for next gen sequencing users

Dcode.org

University of Wisconsin Helpful Links

Madison, Wisconsin Links